Gut Bacteria and Weight Loss: Exploring the Connection
Last Updated: 02 October 2025

Many people think of the gut as simply breaking down food and removing waste, but it does much more than that. Recent research has shown that the gut is complex and can significantly affect overall health. Your gut is home to trillions of different microorganisms, including bacteria, fungi, viruses and even parasites, which all form your gut microbiota. Your gut health is crucial for a number of bodily functions and processes, but did you know that your gut microbiota can actually affect your weight loss efforts?
In this article, we will explore whether there is a link between gut bacteria and weight, how your gut microbiome could affect your weight and if certain gut bacteria are responsible for weight loss. We will also look at which gut bacteria could prevent weight gain and whether the food you eat influences your gut microbiome and weight.
Key Takeaways
Here are the 5 biggest takeaways from this article about the connection between weight loss and gut bacteria:
There is significant evidence suggesting that gut bacteria are linked to weight.
The gut microbiome can affect weight by influencing how the body processes and absorbs food. Some bacteria are more effective at breaking down food, leading to more calories being absorbed, which can result in weight gain.
Certain probiotics, especially those from the Lactobacillus family like Lactobacillus gasseri, are associated with weight loss.
Some strains of gut bacteria may help prevent weight gain, particularly in individuals consuming a high-calorie diet.
The foods you eat can significantly influence your gut microbiome and weight. A diverse, plant-based diet that includes fibre, phenols, fermented foods, and healthy fats supports a healthy microbiome.
Is there a link between gut bacteria and weight?
There is a growing amount of evidence that suggests a link between gut bacteria and weight. Scientists have discovered that people with obesity often have different and less diverse groups of bacteria in their guts compared to people who are not obese [1]. This difference is also apparent in twins, indicating that the gut microbiome may play a role in determining a person's weight.
While the exact mechanisms of how your gut microbiome influences your weight are not entirely clear, research is ongoing. In one study, mice that received gut bacteria of people with obesity, gained weight and fat, and their metabolism and gut microbiomes changed significantly [2]. Studies also suggest that the composition of the gut microbiome can predict an individual’s response to weight loss interventions, emphasising the potential impact of gut bacteria on weight management [3].
How could your gut microbiome affect your weight?
The gut microbiome can significantly affect your weight by influencing how your body processes and absorbs food. When we eat, the digestive system breaks food down into nutrients. Nutrients are then absorbed into the bloodstream, while the indigestible parts are eliminated as waste; gut bacteria help this process. Some types of gut bacteria are more effective at breaking down food than others.
In a study, gut bacteria from obese mice that were transferred into lean, germ-free mice caused weight gain while gut bacteria transferred from lean mice did not cause weight gain. This suggests that the composition of the gut microbiome plays a crucial role in weight management, highlighting the potential impact it could have on the future of weight loss [4].
Are certain gut bacteria responsible for weight loss?
Certain gut bacteria do seem to be linked with weight loss, though the exact mechanisms are not yet fully understood.
Probiotics
Probiotics, along with other beneficial gut bacteria, can influence how the body uses and stores energy. One way they do this is by producing short-chain fatty acids (SCFAs) during the fermentation of dietary fibre. SCFAs can affect how our body uses energy and may also inhibit the absorption of fat, leading to more fat being excreted rather than stored. This process reduces the number of calories our body absorbs from food.
Specific bacteria from the Lactobacillus family have been found to work in this way. Strains such as Lactobacillus gasseri have been particularly effective in reducing weight and visceral fat [5]. Probiotics may also increase levels of fat-regulating proteins like angiopoietin-like 4 (ANGPTL4) which further aid in weight management [6].Several strains from both the Lactobacillus and Bifidobacterium families have shown promising results in reducing weight and belly fat, suggesting that certain gut bacteria indeed play a role in weight loss [7].
Can gut bacteria prevent weight gain?
Certain strains of gut bacteria may help prevent weight gain, especially in people following a high-calorie diet. However, not all probiotics are beneficial for weight management and some may even cause weight gain [8]. The effects of probiotics are strain-specific and can vary from person to person [9]. This emphasises the importance of a personalised approach to using probiotics for weight management.
Can the food you eat influence your gut microbiome and weight?
The foods you eat can significantly influence your gut microbiome and your weight. Rather than trying to incorporate one ‘super’ food into your diet, it is important that you eat a diverse diet that supports a well-rounded and healthy microbiome. This can be achieved by eating various plant-based foods that help the beneficial bacteria in your gut.
Following "Four Fs" are particularly beneficial [10]:
Fibre: Found in fruits, vegetables, whole grains, nuts and beans, fibre is not digested in the upper GI tract. Instead, it reaches the lower gut, where healthy bacteria ferment it, producing short-chain fatty acids that regulate appetite and satiety.
Polyphenols: These antioxidant compounds, which give plant-based foods their colour, are essential for a healthy microbiome. Including a variety of colours in your diet ensures a range of polyphenols, which your gut microbes feed on.
Fermented foods: Foods like sauerkraut, kimchi, kefir, yoghurt, miso, tempeh and kombucha introduce beneficial bacteria into your gut and make phenols more accessible.
Healthy fats: Omega-3 fatty acids, found in fatty fish, canola oil and some nuts reduce inflammation in the gut lining. Foods like extra-virgin olive oil and avocados are also rich in phenols.
Nutritionist's Corner: Final Thoughts
The connection between gut health and weight management is becoming increasingly clear, with research suggesting that the composition of gut bacteria plays a significant role in how our body processes food and stores fat. Certain gut bacteria, especially probiotics from the Lactobacillus family, have been linked to weight loss, while others may help prevent weight gain, particularly in individuals on high-calorie diets. The foods we consume have a direct impact on the diversity and health of our gut microbiome, with a varied, plant-based diet being the key to supporting beneficial gut bacteria. By incorporating fibre, phenols, fermented foods, and healthy fats, we can help maintain a healthy gut microbiome that supports both our overall health and weight management goals.
While gut health is not the only factor that influences weight, emerging research indicates that the gut microbiome plays an important role in metabolism, appetite regulation, and how the body processes nutrients. This means that lasting weight management is about more than just counting calories, it may also about nurturing a healthy balance of bacteria in your gut. By diversifying your diet, choosing foods that feed beneficial microbes, and considering targeted probiotics, you can create the right conditions to support weight regulation and overall well-being.
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Sources
[1] A core gut microbiome in obese and lean twins - PMC
[4] Do gut bacteria inhibit weight loss? - Harvard Health
[9] Probiotics for the control of obesity - Its effect on weight change - PubMed
Author

Yusra Serdaroglu Aydin, MSc RD
Head of Nutrition and Registered Dietitian
Yusra is a registered dietitian with a multidisciplinary background in nutrition, food engineering, and culinary arts. During her education, her curio...
Peer Reviewed by

Rosie Warwick, BSc (Hons) RD
Dietitian
Rosie is an HCPC-registered clinical dietitian with experience across both paediatric and adult settings. Her current role focuses on specialist weigh...